Stem-loop cpo-mir-1185

Accession

MI0038849

Description

Cavia porcellus cpo-mir-1185 precursor miRNA

Sequence

AGAGGAUACCCUUUGUAUGUUCacuuuauaaauggugaAUAUACAGGGGGAGACUCUUAU
((((..(.(((((((((((((((((........))))))))))))))))))..))))...

Structure

---    GA A                 uua 
   AGAG  U CCCUUUGUAUGUUCacu   u
   ||||  | |||||||||||||||||    
   UCUC  A GGGGGACAUAUAagugg   a
UAU    AG -                 uaa 

Annotation confidence Not enough data

Genome context

DS562966.1: 1097764-1097823 [+]

Clustered miRNAs

18 other miRNAs are < 10 kb from cpo-mir-1185

Mature cpo-miR-1185-5p

• Accession: MIMAT0047399
• Description: Cavia porcellus cpo-miR-1185-5p mature miRNA
• Sequence: 1 - AGAGGAUACCCUUUGUAUGUUC - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-1185-3p

• Accession: MIMAT0047400
• Description: Cavia porcellus cpo-miR-1185-3p mature miRNA
• Sequence: 39 - AUAUACAGGGGGAGACUCUUAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344