Stem-loop cpo-mir-758

Accession

MI0038840

Description

Cavia porcellus cpo-mir-758 precursor miRNA

Sequence

AUGGUUGACCAGAGAGCACACGcuauauuugugccgUUUGUGACCUGGUCCACUAACC
.((((.((((((.(.(((.(((.(((....))).))).)))..))))))).))))...

Structure

--A    U      A -A   C   c   a 
   UGGU GACCAG G  GCA ACG uau u
   |||| |||||| |  ||| ||| |||  
   AUCA CUGGUC C  UGU Ugc gug u
CCA    C      - AG   U   c   u 

Annotation confidence Not enough data

Genome context

DS562966.1: 1085914-1085971 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from cpo-mir-758

Mature cpo-miR-758-5p

• Accession: MIMAT0047381
• Description: Cavia porcellus cpo-miR-758-5p mature miRNA
• Sequence: 1 - AUGGUUGACCAGAGAGCACACG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-758-3p

• Accession: MIMAT0047382
• Description: Cavia porcellus cpo-miR-758-3p mature miRNA
• Sequence: 37 - UUUGUGACCUGGUCCACUAACC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344