Stem-loop cpo-mir-660

Accession

MI0038832

Description

Cavia porcellus cpo-mir-660 precursor miRNA

Sequence

UACCCAUUGCAUAUCGGAGUUGUgaauucuuaaaauAUCUCCUGUAUGCAUGGAUUAUA
...((((.((((((.((((.(((...........))).)))).))))))))))......

Structure

---UAC    U      C    U   gaau 
      CCAU GCAUAU GGAG UGU    u
      |||| |||||| |||| |||    c
      GGUA CGUAUG CCUC Aua    u
AUAUUA    -      U    U   aaau 

Annotation confidence Not enough data

Genome context

DS562987.1: 3012570-3012628 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from cpo-mir-660

Mature cpo-miR-660-5p

• Accession: MIMAT0047365
• Description: Cavia porcellus cpo-miR-660-5p mature miRNA
• Sequence: 1 - UACCCAUUGCAUAUCGGAGUUGU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-660-3p

• Accession: MIMAT0047366
• Description: Cavia porcellus cpo-miR-660-3p mature miRNA
• Sequence: 37 - AUCUCCUGUAUGCAUGGAUUAUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344