Stem-loop cpo-mir-655

Accession

MI0038830

Description

Cavia porcellus cpo-mir-655 precursor miRNA

Sequence

AGAGGUUAUCCGUGAUAUGUUCgcuucauucaucaugaAUAAUACAUGGUUAACCUCUUU
((((((((.(((((...((((((............))))))...))))).))))))))..

Structure

--        U     AUA      cuuca 
  AGAGGUUA CCGUG   UGUUCg     u
  |||||||| |||||   ||||||      
  UCUCCAAU GGUAC   AUAagu     u
UU        U     AUA      acuac 

Annotation confidence Not enough data

Genome context

DS562966.1: 1102750-1102809 [+]

Clustered miRNAs

16 other miRNAs are < 10 kb from cpo-mir-655

Mature cpo-miR-655-5p

• Accession: MIMAT0047361
• Description: Cavia porcellus cpo-miR-655-5p mature miRNA
• Sequence: 1 - AGAGGUUAUCCGUGAUAUGUUC - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-655-3p

• Accession: MIMAT0047362
• Description: Cavia porcellus cpo-miR-655-3p mature miRNA
• Sequence: 39 - AUAAUACAUGGUUAACCUCUUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344