Stem-loop cpo-mir-532

Accession

MI0038817

Description

Cavia porcellus cpo-mir-532 precursor miRNA

Sequence

CAUGCCUUGAGUGUAGGACCGUuggcgucuuaauuacCCUCCCACACCCAAGGCUUGCA
((.((((((.((((.(((.....((.((.......))))))).)))).)))))).))..

Structure

--  U      A    A   CCGUu  c  cu 
  CA GCCUUG GUGU GGA     gg gu  u
  || |||||| |||| |||     || ||  a
  GU CGGAAC CACA CCU     CC ca  a
AC  U      C    C   -----  -  uu 

Annotation confidence Not enough data

Genome context

DS562987.1: 3003104-3003162 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from cpo-mir-532

Mature cpo-miR-532-5p

• Accession: MIMAT0047335
• Description: Cavia porcellus cpo-miR-532-5p mature miRNA
• Sequence: 1 - CAUGCCUUGAGUGUAGGACCGU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-532-3p

• Accession: MIMAT0047336
• Description: Cavia porcellus cpo-miR-532-3p mature miRNA
• Sequence: 38 - CCUCCCACACCCAAGGCUUGCA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344