Stem-loop cpo-mir-509d

Accession

MI0038813

Description

Cavia porcellus cpo-mir-509d precursor miRNA

Sequence

UCCUUCAGAAAGAUGCAAUCAUUuauguuugaauaUGAUUGCAUCCUCUGAGGGAGA
(((((((((..(((((((((((............))))))))))).)))))))))..

Structure

--         AA           Uuaug 
  UCCUUCAGA  GAUGCAAUCAU     u
  |||||||||  |||||||||||      
  AGGGAGUCU  CUACGUUAGUa     u
AG         -C           uaagu 

Annotation confidence Not enough data

Genome context

DS562939.1: 2715444-2715500 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-509d

Mature cpo-miR-509d-5p

• Accession: MIMAT0047327
• Description: Cavia porcellus cpo-miR-509d-5p mature miRNA
• Sequence: 1 - UCCUUCAGAAAGAUGCAAUCAUU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-509d-3p

• Accession: MIMAT0047328
• Description: Cavia porcellus cpo-miR-509d-3p mature miRNA
• Sequence: 36 - UGAUUGCAUCCUCUGAGGGAGA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344