Stem-loop cpo-mir-509b

Accession

MI0038811

Description

Cavia porcellus cpo-mir-509b precursor miRNA

Sequence

UACUUCACAGAAUCUCGAUCAUGucuaaauaaauaUGAUCGAAUCCUAUGAAGUAGA
(((((((.((.((.((((((((((........)))))))))))).)).)))))))..

Structure

--       C  A  C          cua 
  UACUUCA AG AU UCGAUCAUGu   a
  ||||||| || || ||||||||||    
  AUGAAGU UC UA AGCUAGUaua   a
AG       A  C  -          aau 

Annotation confidence Not enough data

Genome context

DS562939.1: 2748262-2748318 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-509b

Mature cpo-miR-509b-5p

• Accession: MIMAT0047323
• Description: Cavia porcellus cpo-miR-509b-5p mature miRNA
• Sequence: 1 - UACUUCACAGAAUCUCGAUCAUG - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-509b-3p

• Accession: MIMAT0047324
• Description: Cavia porcellus cpo-miR-509b-3p mature miRNA
• Sequence: 36 - UGAUCGAAUCCUAUGAAGUAGA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344