Stem-loop cpo-mir-509a

Accession

MI0038810

Description

Cavia porcellus cpo-mir-509a precursor miRNA

Sequence

UUCUUCAGAGAGUUUUAGUCGUUuguaauuaaguaUGACUGAAGCAUCUGAGGGAGA
(((((((((..(((((((((((............))))))))))).)))))))))..

Structure

--         GA           Uugua 
  UUCUUCAGA  GUUUUAGUCGU     a
  |||||||||  |||||||||||      
  AGGGAGUCU  CGAAGUCAGUa     u
AG         -A           ugaau 

Annotation confidence Not enough data

Genome context

DS562939.1: 2739521-2739577 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-509a

Mature cpo-miR-509a-5p

• Accession: MIMAT0047321
• Description: Cavia porcellus cpo-miR-509a-5p mature miRNA
• Sequence: 1 - UUCUUCAGAGAGUUUUAGUCGUU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-509a-3p

• Accession: MIMAT0047322
• Description: Cavia porcellus cpo-miR-509a-3p mature miRNA
• Sequence: 36 - UGACUGAAGCAUCUGAGGGAGA - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344