Stem-loop cpo-mir-507b

Accession

MI0038808

Description

Cavia porcellus cpo-mir-507b precursor miRNA

Sequence

CACUCAAAAAGGUGCCAUUCAgguaaauuaaaauaugAUUGGCACUUUUUUGAGUGCA
(((((((((((((((((.(((.((........)).))).)))))))))))))))))..

Structure

--                 U   g  aaa 
  CACUCAAAAAGGUGCCA UCA gu   u
  ||||||||||||||||| ||| ||    
  GUGAGUUUUUUCACGGU Agu ua   u
AC                 U   a  aaa 

Annotation confidence Not enough data

Genome context

DS562939.1: 2763265-2763322 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-507b

Mature cpo-miR-507b-5p

• Accession: MIMAT0047317
• Description: Cavia porcellus cpo-miR-507b-5p mature miRNA
• Sequence: 1 - CACUCAAAAAGGUGCCAUUCA - 21
• Evidence: not_experimental

Mature cpo-miR-507b-3p

• Accession: MIMAT0047318
• Description: Cavia porcellus cpo-miR-507b-3p mature miRNA
• Sequence: 38 - AUUGGCACUUUUUUGAGUGCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344