Stem-loop cpo-mir-503

Accession

MI0038803

Description

Cavia porcellus cpo-mir-503 precursor miRNA

Sequence

UAGCAGCGGGAACAGUACUGCAGugagggauuugugcucuGGAGUGUUGUUUCUGCUGCCAGG
..(((((((((((((((((.(((...((........))))).)))))))))))))))))....

Structure

--UA                 G   uga  gau 
    GCAGCGGGAACAGUACU CAG   gg   u
    ||||||||||||||||| |||   ||    
    CGUCGUCUUUGUUGUGA Guc   uc   u
GGAC                 G   ---  gug 

Annotation confidence Not enough data

Genome context

DS562983.1: 2878959-2879021 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cpo-mir-503

Mature cpo-miR-503-5p

• Accession: MIMAT0047307
• Description: Cavia porcellus cpo-miR-503-5p mature miRNA
• Sequence: 1 - UAGCAGCGGGAACAGUACUGCAG - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-503-3p

• Accession: MIMAT0047308
• Description: Cavia porcellus cpo-miR-503-3p mature miRNA
• Sequence: 41 - GGAGUGUUGUUUCUGCUGCCAGG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344