Stem-loop cpo-mir-496

Accession

MI0038796

Description

Cavia porcellus cpo-mir-496 precursor miRNA

Sequence

GGUUGUCCAUGGUGUGUUCAUUuuauuuaugaUGAGUAUUACAUGGCCAAUCUC
(((((.(((((..(((((((((........)))))))))..))))).)))))..

Structure

--     U     GU         uua 
  GGUUG CCAUG  GUGUUCAUU   u
  ||||| |||||  |||||||||    
  CUAAC GGUAC  UAUGAGUag   u
CU     C     AU         uau 

Annotation confidence Not enough data

Genome context

DS562966.1: 1113040-1113093 [+]

Clustered miRNAs

14 other miRNAs are < 10 kb from cpo-mir-496

Mature cpo-miR-496-5p

• Accession: MIMAT0047293
• Description: Cavia porcellus cpo-miR-496-5p mature miRNA
• Sequence: 1 - GGUUGUCCAUGGUGUGUUCAUU - 22
• Evidence: not_experimental

Mature cpo-miR-496-3p

• Accession: MIMAT0047294
• Description: Cavia porcellus cpo-miR-496-3p mature miRNA
• Sequence: 33 - UGAGUAUUACAUGGCCAAUCUC - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344