Stem-loop cpo-mir-487b

Accession

MI0038790

Description

Cavia porcellus cpo-mir-487b precursor miRNA

Sequence

GUGGUUAUCCCUGUCCUGUUCGuuucacucacgucgAAUCGUACAGGGUCAUCCACUU
((((....((((((.(.(((((............))))).).))))))....))))..

Structure

--    UUAU      C U     uuuca 
  GUGG    CCCUGU C GUUCG     c
  ||||    |||||| | |||||      
  CACC    GGGACA G UAAgc     u
UU    UACU      U C     ugcac 

Annotation confidence Not enough data

Genome context

DS562966.1: 1099737-1099794 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from cpo-mir-487b

Mature cpo-miR-487b-5p

• Accession: MIMAT0047281
• Description: Cavia porcellus cpo-miR-487b-5p mature miRNA
• Sequence: 1 - GUGGUUAUCCCUGUCCUGUUCG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-487b-3p

• Accession: MIMAT0047282
• Description: Cavia porcellus cpo-miR-487b-3p mature miRNA
• Sequence: 37 - AAUCGUACAGGGUCAUCCACUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344