Stem-loop cpo-mir-454

Accession

MI0038784

Description

Cavia porcellus cpo-mir-454 precursor miRNA

Sequence

ACCCUAUCAAUAUUGUCUCUGCUguauaaauagcucugagUAGUGCAAUAUUGCUUAUAGGGUUU
(((((((((((((((((((.(((((....)))))...)))....)))))))))...)))))))..

Structure

--       ---         ----   --U     a 
  ACCCUAU   CAAUAUUGU    CUC   GCUgu u
  |||||||   |||||||||    |||   |||||  
  UGGGAUA   GUUAUAACG    gag   cgaua a
UU       UUC         UGAU   ucu     a 

Annotation confidence Not enough data

Genome context

DS562887.1: 7083450-7083514 [-]

Mature cpo-miR-454-5p

• Accession: MIMAT0047269
• Description: Cavia porcellus cpo-miR-454-5p mature miRNA
• Sequence: 1 - ACCCUAUCAAUAUUGUCUCUGCU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-454-3p

• Accession: MIMAT0047270
• Description: Cavia porcellus cpo-miR-454-3p mature miRNA
• Sequence: 41 - UAGUGCAAUAUUGCUUAUAGGGUUU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344