Stem-loop cpo-mir-452

Accession

MI0038783

Description

Cavia porcellus cpo-mir-452 precursor miRNA

Sequence

AACUGUUUGCAGAGGAAACUGAGAcuuugcaacuaugucUCAGUCUCAUCUGCAAAGAAGU
.(((.((((((((.((.((((((((...........)))))))).)).))))))))..)))

Structure

A   -G        G  A        uuug 
 ACU  UUUGCAGA GA ACUGAGAc    c
 |||  |||||||| || ||||||||    a
 UGA  AAACGUCU CU UGACUcug    a
-   AG        A  C        uauc 

Annotation confidence Not enough data

Genome context

DS563052.1: 1057810-1057870 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-452

Mature cpo-miR-452-5p

• Accession: MIMAT0047267
• Description: Cavia porcellus cpo-miR-452-5p mature miRNA
• Sequence: 1 - AACUGUUUGCAGAGGAAACUGAGA - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-452-3p

• Accession: MIMAT0047268
• Description: Cavia porcellus cpo-miR-452-3p mature miRNA
• Sequence: 40 - UCAGUCUCAUCUGCAAAGAAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344