Stem-loop cpo-mir-448

Accession

MI0038776

Description

Cavia porcellus cpo-mir-448 precursor miRNA

Sequence

GAACAUCCUGCAUGGUGCUGCCacgaaaucccuuugucauacuaagaggggacuggcuggUUGCACAUGUAGGAUGUCCCA
..((((((((((((.(((.(((((.(..(((((((.........)))))))..).).)))).)))))))))))))))....

Structure

--GA            G   U    - g aa       guc 
    ACAUCCUGCAUG UGC GCCa c a  ucccuuu   a
    |||||||||||| ||| |||| | |  |||||||   u
    UGUAGGAUGUAC ACG Uggu g u  ggggaga   a
ACCC            -   U    c g ca       auc 

Annotation confidence Not enough data

Genome context

DS562901.1: 5141151-5141231 [-]

Mature cpo-miR-448-5p

• Accession: MIMAT0047255
• Description: Cavia porcellus cpo-miR-448-5p mature miRNA
• Sequence: 1 - GAACAUCCUGCAUGGUGCUGCC - 22
• Evidence: not_experimental

Mature cpo-miR-448-3p

• Accession: MIMAT0047256
• Description: Cavia porcellus cpo-miR-448-3p mature miRNA
• Sequence: 61 - UUGCACAUGUAGGAUGUCCCA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344