Stem-loop cpo-mir-432

Accession

MI0038774

Description

Cavia porcellus cpo-mir-432 precursor miRNA

Sequence

UCUUGGAGUAGGUCAUUGGGUGGauccucuauuucccuaugcgggccACUGGAUGGCUCCUCCAUGUCU
...(((((..(((((((.(((((.(((..(((......))).)))))))).))))))).))))).....

Structure

--UCU     UA       G     a   uc   uu 
     UGGAG  GGUCAUU GGUGG ucc  uau  c
     |||||  ||||||| ||||| |||  |||   
     ACCUC  UCGGUAG UCAcc ggg  gua  c
UCUGU     -C       G     -   -c   uc 

Annotation confidence Not enough data

Genome context

DS562966.1: 955129-955197 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from cpo-mir-432

Mature cpo-miR-432-5p

• Accession: MIMAT0047251
• Description: Cavia porcellus cpo-miR-432-5p mature miRNA
• Sequence: 1 - UCUUGGAGUAGGUCAUUGGGUGG - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-432-3p

• Accession: MIMAT0047252
• Description: Cavia porcellus cpo-miR-432-3p mature miRNA
• Sequence: 48 - ACUGGAUGGCUCCUCCAUGUCU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344