Stem-loop cpo-mir-431

Accession

MI0038773

Description

Cavia porcellus cpo-mir-431 precursor miRNA

Sequence

UGUCUUGCAGGCCGUCAUGCAggccacacugacgguaacguugCAGGUCGUCUUGCAGGGCUUC
.((((((((((.((.(.((((((((........)))....))))).).)).))))))))))...

Structure

--U          C  U A     ----   aca 
   GUCUUGCAGG CG C UGCAg    gcc   c
   |||||||||| || | |||||    |||    
   CGGGACGUUC GC G ACguu    ugg   u
CUU          U  U G     gcaa   cag 

Annotation confidence Not enough data

Genome context

DS562966.1: 951653-951716 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from cpo-mir-431

Mature cpo-miR-431-5p

• Accession: MIMAT0047249
• Description: Cavia porcellus cpo-miR-431-5p mature miRNA
• Sequence: 1 - UGUCUUGCAGGCCGUCAUGCA - 21
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-431-3p

• Accession: MIMAT0047250
• Description: Cavia porcellus cpo-miR-431-3p mature miRNA
• Sequence: 44 - CAGGUCGUCUUGCAGGGCUUC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344