Stem-loop cpo-mir-425

Accession

MI0038771

Description

Cavia porcellus cpo-mir-425 precursor miRNA

Sequence

AAUGACACGAUCACUCCCGUUGAGugggcacccaagaagccAUCGGGAAUGUCGUGUCCGCCC
...(((((((.((.(((((....((((............))))))))).))))))))).....

Structure

--AAU       U  C     UUGA    gcacc 
     GACACGA CA UCCCG    Gugg     c
     ||||||| || |||||    ||||      
     CUGUGCU GU AGGGC    UAcc     a
CCCGC       -  A     ----    gaaga 

Annotation confidence Not enough data

Genome context

DS562863.1: 24185548-24185610 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-425

Mature cpo-miR-425-5p

• Accession: MIMAT0047245
• Description: Cavia porcellus cpo-miR-425-5p mature miRNA
• Sequence: 1 - AAUGACACGAUCACUCCCGUUGAG - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-425-3p

• Accession: MIMAT0047246
• Description: Cavia porcellus cpo-miR-425-3p mature miRNA
• Sequence: 42 - AUCGGGAAUGUCGUGUCCGCCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344