Stem-loop cpo-mir-424

Accession

MI0038770

Description

Cavia porcellus cpo-mir-424 precursor miRNA

Sequence

CAGCAGCAAUUCAUGUUUUGAAguauucuaaacuguuCAAAACGUGAGGCGCUGCUAUA
.((((((..(((((((((((((.............)))))))))))))..))))))...

Structure

--C      AA             guauu 
   AGCAGC  UUCAUGUUUUGAA     c
   ||||||  |||||||||||||     u
   UCGUCG  GAGUGCAAAACuu     a
AUA      CG             gucaa 

Annotation confidence Not enough data

Genome context

DS562983.1: 2879319-2879377 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from cpo-mir-424

Mature cpo-miR-424-5p

• Accession: MIMAT0047243
• Description: Cavia porcellus cpo-miR-424-5p mature miRNA
• Sequence: 1 - CAGCAGCAAUUCAUGUUUUGAA - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-424-3p

• Accession: MIMAT0047244
• Description: Cavia porcellus cpo-miR-424-3p mature miRNA
• Sequence: 38 - CAAAACGUGAGGCGCUGCUAUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344