Stem-loop cpo-mir-412

Accession

MI0038768

Description

Cavia porcellus cpo-mir-412 precursor miRNA

Sequence

UGGUCGACCAGUUGGAAAGUAAUugucucuaaugUACUUCACCUGGUCCACUAGCC
((((.((((((.(((..((((((((....)))).))))))).)))))).))))...

Structure

---    C      U   AA    -    u 
   UGGU GACCAG UGG  AGUA AUug c
   |||| |||||| |||  |||| ||||  
   AUCA CUGGUC ACU  UCAU uaau u
CCG    C      C   --    g    c 

Annotation confidence Not enough data

Genome context

DS562966.1: 1117221-1117276 [+]

Clustered miRNAs

11 other miRNAs are < 10 kb from cpo-mir-412

Mature cpo-miR-412-5p

• Accession: MIMAT0047239
• Description: Cavia porcellus cpo-miR-412-5p mature miRNA
• Sequence: 1 - UGGUCGACCAGUUGGAAAGUAAU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-412-3p

• Accession: MIMAT0047240
• Description: Cavia porcellus cpo-miR-412-3p mature miRNA
• Sequence: 35 - UACUUCACCUGGUCCACUAGCC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344