Stem-loop cpo-mir-410

Accession

MI0038766

Description

Cavia porcellus cpo-mir-410 precursor miRNA

Sequence

AGGUUGUCUGUGAUGAGUUCGcuuuauuaaugacgAAUAUAACACAGAUGGCCUGU
((((((((((((.((.((((((.........).))))).)).))))))))))))..

Structure

--            A  A     - uuu 
  AGGUUGUCUGUG UG GUUCG c   a
  |||||||||||| || ||||| |   u
  UCCGGUAGACAC AU UAAgc g   u
UG            A  A     a uaa 

Annotation confidence Not enough data

Genome context

DS562966.1: 1117656-1117711 [+]

Clustered miRNAs

10 other miRNAs are < 10 kb from cpo-mir-410

Mature cpo-miR-410-5p

• Accession: MIMAT0047235
• Description: Cavia porcellus cpo-miR-410-5p mature miRNA
• Sequence: 1 - AGGUUGUCUGUGAUGAGUUCG - 21
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-410-3p

• Accession: MIMAT0047236
• Description: Cavia porcellus cpo-miR-410-3p mature miRNA
• Sequence: 36 - AAUAUAACACAGAUGGCCUGU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344