Stem-loop cpo-mir-378

Accession

MI0038758

Description

Cavia porcellus cpo-mir-378 precursor miRNA

Literature search

1 open access papers mention cpo-mir-378
(3 sentences)

Sequence

CUCCUGACUCCAGGUCCUGUGUguuaccucgaaauagcACUGGACUUGGAGUCAGAAGGC
((.((((((((((((((.((((..(........)..)))).)))))))))))))).))..

Structure

--  C              U    gu acc 
  CU CUGACUCCAGGUCC GUGU  u   u
  || |||||||||||||| ||||  |    
  GA GACUGAGGUUCAGG CAcg  a   c
CG  A              U    au aag 

Annotation confidence Not enough data

Genome context

DS562861.1: 11631876-11631935 [+]

Mature cpo-miR-378-5p

• Accession: MIMAT0047219
• Description: Cavia porcellus cpo-miR-378-5p mature miRNA
• Sequence: 1 - CUCCUGACUCCAGGUCCUGUGU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-378-3p

• Accession: MIMAT0047220
• Description: Cavia porcellus cpo-miR-378-3p mature miRNA
• Sequence: 39 - ACUGGACUUGGAGUCAGAAGGC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344