Stem-loop cpo-mir-362

Accession

MI0038743

Description

Cavia porcellus cpo-mir-362 precursor miRNA

Sequence

AAUCCUUGGGAACCUAGGUGUGAGUGcugcuucagugcAACACACCUAUUCAAGGAUUCA
((((((((((....((((((((.((((((...))))))..))))))))))))))))))..

Structure

--          AACC        -A      c 
  AAUCCUUGGG    UAGGUGUG  GUGcug  
  ||||||||||    ||||||||  |||||| u
  UUAGGAACUU    AUCCACAC  cgugac  
AC          ----        AA      u 

Annotation confidence Not enough data

Genome context

DS562987.1: 3009085-3009144 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from cpo-mir-362

Mature cpo-miR-362-5p

• Accession: MIMAT0047190
• Description: Cavia porcellus cpo-miR-362-5p mature miRNA
• Sequence: 1 - AAUCCUUGGGAACCUAGGUGUGAGUG - 26
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-362-3p

• Accession: MIMAT0047191
• Description: Cavia porcellus cpo-miR-362-3p mature miRNA
• Sequence: 39 - AACACACCUAUUCAAGGAUUCA - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344