Stem-loop cpo-mir-346

Accession

MI0038740

Description

Cavia porcellus cpo-mir-346 precursor miRNA

Sequence

UGUCUGCCCGCAUGCCUGCCUCUcuguugcucugaaggAGGCAGGGGCUGGGCCUGCAGC
(((..((((((...((((((((.((..........)))))))))).)).))))..)))..

Structure

--   CU    -  AUG        U  guug 
  UGU  GCCC GC   CCUGCCUC cu    c
  |||  |||| ||   |||||||| ||     
  ACG  CGGG CG   GGACGGAg ga    u
CG   UC    U  --G        -  aguc 

Annotation confidence Not enough data

Genome context

DS562917.1: 5918308-5918367 [+]

Mature cpo-miR-346-5p

• Accession: MIMAT0047184
• Description: Cavia porcellus cpo-miR-346-5p mature miRNA
• Sequence: 1 - UGUCUGCCCGCAUGCCUGCCUCU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-346-3p

• Accession: MIMAT0047185
• Description: Cavia porcellus cpo-miR-346-3p mature miRNA
• Sequence: 39 - AGGCAGGGGCUGGGCCUGCAGC - 60
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344