Stem-loop cpo-mir-345

Accession

MI0038739

Description

Cavia porcellus cpo-mir-345 precursor miRNA

Sequence

GCUGACUCCCAGUCCAGUGCUcgugaucccagccgggCCCUGAACUAGGGGUCUGGAG
...((((((.(((.(((.(((((.(.......)))))).))).))).)))))).....

Structure

--GCU      C   C   U     u au 
     GACUCC AGU CAG GCUcg g  c
     |||||| ||| ||| ||||| |  c
     CUGGGG UCA GUC Cgggc c  c
GAGGU      A   A   C     - ga 

Annotation confidence Not enough data

Genome context

DS562966.1: 6113-6170 [+]

Mature cpo-miR-345-5p

• Accession: MIMAT0047182
• Description: Cavia porcellus cpo-miR-345-5p mature miRNA
• Sequence: 1 - GCUGACUCCCAGUCCAGUGCU - 21
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-345-3p

• Accession: MIMAT0047183
• Description: Cavia porcellus cpo-miR-345-3p mature miRNA
• Sequence: 38 - CCCUGAACUAGGGGUCUGGAG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344