Stem-loop cpo-mir-340

Accession

MI0038737

Description

Cavia porcellus cpo-mir-340 precursor miRNA

Sequence

UUAUAAAGCAAUGAGACUGAUUgucauuugucuuuugugggaUCCGUCUCAGUUACUUUAUAGCC
((((((((...((((((.((((.((((.........)))))))).))))))....))))))))..

Structure

--        -CAA      U    g    uug 
  UUAUAAAG    UGAGAC GAUU ucau   u
  ||||||||    |||||| |||| ||||   c
  GAUAUUUC    ACUCUG CUag ggug   u
CC        AUUG      C    -    uuu 

Annotation confidence Not enough data

Genome context

DS563031.1: 84280-84344 [+]

Mature cpo-miR-340-5p

• Accession: MIMAT0047178
• Description: Cavia porcellus cpo-miR-340-5p mature miRNA
• Sequence: 1 - UUAUAAAGCAAUGAGACUGAUU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-340-3p

• Accession: MIMAT0047179
• Description: Cavia porcellus cpo-miR-340-3p mature miRNA
• Sequence: 43 - UCCGUCUCAGUUACUUUAUAGCC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344