Stem-loop cpo-mir-330

Accession

MI0038731

Description

Cavia porcellus cpo-mir-330 precursor miRNA

Sequence

UCUCUGGGCCUGUGUCUUAGGCUcugcaagaucaaccgagCAAAGCACACGGCCUGCAGAGAGG
((((((((((((((.(((..((((.............)))).))))))).))))..))))))..

Structure

--      --    -    U   AG    ugcaa 
  UCUCUG  GGCC UGUG CUU  GCUc     g
  ||||||  |||| |||| |||  ||||     a
  AGAGAC  CCGG ACAC GAA  Cgag     u
GG      GU    C    -   -A    ccaac 

Annotation confidence Not enough data

Genome context

DS562935.1: 6059868-6059931 [-]

Mature cpo-miR-330-5p

• Accession: MIMAT0047166
• Description: Cavia porcellus cpo-miR-330-5p mature miRNA
• Sequence: 1 - UCUCUGGGCCUGUGUCUUAGGCU - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-330-3p

• Accession: MIMAT0047167
• Description: Cavia porcellus cpo-miR-330-3p mature miRNA
• Sequence: 41 - CAAAGCACACGGCCUGCAGAGAGG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344