Stem-loop cpo-mir-302d

Accession

MI0038724

Description

Cavia porcellus cpo-mir-302d precursor miRNA

Sequence

ACUCCGACAUGGGGCACUUGCUgcggcgugacucaaaUAAGUGCUUCCAUGUUUGAGCGC
.(((.(((((((((((((((.((.(......).))..))))))).)))))))).)))...

Structure

--A   C        -       -C  c gc 
   CUC GACAUGGG GCACUUG  Ug g  g
   ||| |||||||| |||||||  || |   
   GAG UUGUACCU CGUGAAU  ac c  u
CGC   U        U       aa  u ag 

Annotation confidence Not enough data

Genome context

DS562898.1: 11471856-11471915 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cpo-mir-302d

Mature cpo-miR-302d-5p

• Accession: MIMAT0047152
• Description: Cavia porcellus cpo-miR-302d-5p mature miRNA
• Sequence: 1 - ACUCCGACAUGGGGCACUUGCU - 22
• Evidence: not_experimental

Mature cpo-miR-302d-3p

• Accession: MIMAT0047153
• Description: Cavia porcellus cpo-miR-302d-3p mature miRNA
• Sequence: 38 - UAAGUGCUUCCAUGUUUGAGCGC - 60
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344