Stem-loop cpo-mir-302c

Accession

MI0038723

Description

Cavia porcellus cpo-mir-302c precursor miRNA

Sequence

GCUUUAACAUGGGGGUACCUGCUgugcaaaggaaagUAAGUGCUUCCAUGUUUGAGUGG
((((.(((((((((((((.((((...........)))).))))))))))))).))))..

Structure

--    U             C    gugc 
  GCUU AACAUGGGGGUAC UGCU    a
  |||| ||||||||||||| ||||    a
  UGAG UUGUACCUUCGUG AUga    a
GG    U             A    aagg 

Annotation confidence Not enough data

Genome context

DS562898.1: 11472099-11472157 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from cpo-mir-302c

Mature cpo-miR-302c-5p

• Accession: MIMAT0047150
• Description: Cavia porcellus cpo-miR-302c-5p mature miRNA
• Sequence: 1 - GCUUUAACAUGGGGGUACCUGCU - 23
• Evidence: not_experimental

Mature cpo-miR-302c-3p

• Accession: MIMAT0047151
• Description: Cavia porcellus cpo-miR-302c-3p mature miRNA
• Sequence: 37 - UAAGUGCUUCCAUGUUUGAGUGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344