Stem-loop cpo-mir-301b

Accession

MI0038720

Description

Cavia porcellus cpo-mir-301b precursor miRNA

Sequence

GCUCUGACGAGGUUGCACUACUgugcucugagaagCAGUGCAAUGAUAUUGUCAAAGCAU
(((.((((((.((((((((.((...........)).))))))))....)))))).)))..

Structure

--   C      ---G        A  gugc 
  GCU UGACGA    GUUGCACU CU    u
  ||| ||||||    |||||||| ||    c
  CGA ACUGUU    UAACGUGA ga    u
UA   A      AUAG        C  agag 

Annotation confidence Not enough data

Genome context

DS562859.1: 19664333-19664392 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-301b

Mature cpo-miR-301b-5p

• Accession: MIMAT0047144
• Description: Cavia porcellus cpo-miR-301b-5p mature miRNA
• Sequence: 1 - GCUCUGACGAGGUUGCACUACU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-301b-3p

• Accession: MIMAT0047145
• Description: Cavia porcellus cpo-miR-301b-3p mature miRNA
• Sequence: 36 - CAGUGCAAUGAUAUUGUCAAAGCAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344