Stem-loop cpo-mir-219b

Accession

MI0038712

Description

Cavia porcellus cpo-mir-219b precursor miRNA

Sequence

UGAUUGUCCAAACGCAAUUCUUGuacgagucugcggccaaccgAGAAUUGUGGCUGGACAUCUGU
.(((.(((((..(((((((((((...(.(((...))))...)))))))))))..))))))))...

Structure

--U   U     AA           uac a   u 
   GAU GUCCA  CGCAAUUCUUG   g guc  
   ||| |||||  |||||||||||   | ||| g
   CUA CAGGU  GUGUUAAGAgc   c cgg  
UGU   -     CG           caa -   c 

Annotation confidence Not enough data

Genome context

DS562882.1: 3805724-3805788 [+]

Mature cpo-miR-219b-5p

• Accession: MIMAT0047128
• Description: Cavia porcellus cpo-miR-219b-5p mature miRNA
• Sequence: 1 - UGAUUGUCCAAACGCAAUUCUUG - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-219b-3p

• Accession: MIMAT0047129
• Description: Cavia porcellus cpo-miR-219b-3p mature miRNA
• Sequence: 44 - AGAAUUGUGGCUGGACAUCUGU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344