Stem-loop cpo-mir-216b

Accession

MI0038708

Description

Cavia porcellus cpo-mir-216b precursor miRNA

Sequence

AAAUCUCUGCAGGCAAAUGUGAugucacugaagaaucacACACUUACCUGUAAAGAUUCUG
.(((((.((((((.((.((((((.((......))))))))...)).)))))).)))))...

Structure

--A     C      C  --A      g  ac 
   AAUCU UGCAGG AA   UGUGAu uc  u
   ||||| |||||| ||   |||||| ||   
   UUAGA AUGUCC UU   Acacua ag  g
GUC     A      A  CAC      -  aa 

Annotation confidence Not enough data

Genome context

DS562903.1: 8638120-8638180 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-216b

Mature cpo-miR-216b-5p

• Accession: MIMAT0047121
• Description: Cavia porcellus cpo-miR-216b-5p mature miRNA
• Sequence: 1 - AAAUCUCUGCAGGCAAAUGUGA - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-216b-3p

• Accession: MIMAT0047122
• Description: Cavia porcellus cpo-miR-216b-3p mature miRNA
• Sequence: 40 - ACACUUACCUGUAAAGAUUCUG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344