Stem-loop cpo-mir-210

Accession

MI0038702

Description

Cavia porcellus cpo-mir-210 precursor miRNA

Sequence

gcgcagggcAGCCACUGCCCACCGCACACUGcgcugcucccgacccaCUGUGCGUGUGACAGCGGCUGA
........(((((.(((..(((((((((.((.(.((....)).).)).)))))).))).))).))))).

Structure

gcgcaggg     A   CC   -      C  c c  c 
        cAGCC CUG  CAC CGCACA UG g ug u
        ||||| |||  ||| |||||| || | ||  
        GUCGG GAC  GUG GCGUGU ac c gc c
-------A     C   -A   U      C  c a  c 

Annotation confidence Not enough data

Genome context

DS563073.1: 305335-305403 [+]

Mature cpo-miR-210-5p

• Accession: MIMAT0047109
• Description: Cavia porcellus cpo-miR-210-5p mature miRNA
• Sequence: 10 - AGCCACUGCCCACCGCACACUG - 31
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-210-3p

• Accession: MIMAT0047110
• Description: Cavia porcellus cpo-miR-210-3p mature miRNA
• Sequence: 48 - CUGUGCGUGUGACAGCGGCUGA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344