Stem-loop cpo-mir-197

Accession

MI0038688

Description

Cavia porcellus cpo-mir-197 precursor miRNA

Sequence

CGGGUAGAGAGGGCAGUGGGAGGuaagagcucuucacccUUCACCACCUUCUCCACCCAGC
.((((.(((((((..(((((.((((((....))).))).)))))..))))))).))))...

Structure

--C    A       CA     A   -   a 
   GGGU GAGAGGG  GUGGG GGu aag g
   |||| |||||||  ||||| ||| |||  
   CCCA CUCUUCC  CACUU cca uuc c
CGA    C       AC     c   c   u 

Annotation confidence Not enough data

Genome context

DS562857.1: 33750403-33750463 [+]

Mature cpo-miR-197-5p

• Accession: MIMAT0047084
• Description: Cavia porcellus cpo-miR-197-5p mature miRNA
• Sequence: 1 - CGGGUAGAGAGGGCAGUGGGAGG - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-197-3p

• Accession: MIMAT0047085
• Description: Cavia porcellus cpo-miR-197-3p mature miRNA
• Sequence: 40 - UUCACCACCUUCUCCACCCAGC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344