Stem-loop cpo-mir-196b

Accession

MI0038687

Description

Cavia porcellus cpo-mir-196b precursor miRNA

Sequence

UAGGUAGUUUCCUGUUGUUGGGAuccaccuuucucUCGACAGCACGACACUGCCUUCA
.(((((((.((.(((((((((((..........))))))))))).)).)))))))...

Structure

--U       U  C           ucca 
   AGGUAGU UC UGUUGUUGGGA    c
   ||||||| || |||||||||||     
   UCCGUCA AG ACGACAGCUcu    c
ACU       C  C           cuuu 

Annotation confidence Not enough data

Genome context

DS562899.1: 3907441-3907498 [-]

Mature cpo-miR-196b-5p

• Accession: MIMAT0047082
• Description: Cavia porcellus cpo-miR-196b-5p mature miRNA
• Sequence: 1 - UAGGUAGUUUCCUGUUGUUGGGA - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-196b-3p

• Accession: MIMAT0047083
• Description: Cavia porcellus cpo-miR-196b-3p mature miRNA
• Sequence: 36 - UCGACAGCACGACACUGCCUUCA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344