Stem-loop cpo-mir-196a

Accession

MI0038685

Description

Cavia porcellus cpo-mir-196a precursor miRNA

Sequence

UAGGUAGUUUCAUGUUGUUGGGccugggcuucugaaaaCAACAACAUCAAACCACCCGAU
..(((.((((.(((((((((.....((....)).....))))))))).)))).)))....

Structure

--UA   A    C         GGccu  g 
    GGU GUUU AUGUUGUUG     gg c
    ||| |||| |||||||||     ||  
    CCA CAAA UACAACAAC     uc u
UAGC   C    C         aaaag  u 

Annotation confidence Not enough data

Genome context

DS562908.1: 8623790-8623849 [+]

Mature cpo-miR-196a-5p

• Accession: MIMAT0047078
• Description: Cavia porcellus cpo-miR-196a-5p mature miRNA
• Sequence: 1 - UAGGUAGUUUCAUGUUGUUGGG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-196a-3p

• Accession: MIMAT0047079
• Description: Cavia porcellus cpo-miR-196a-3p mature miRNA
• Sequence: 39 - CAACAACAUCAAACCACCCGAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344