Stem-loop cpo-mir-195

Accession

MI0038684

Description

Cavia porcellus cpo-mir-195 precursor miRNA

Sequence

UAGCAGCACAGAAAUAUUGGCAcugggaagcaagucugCCAAUAUUGGUUGUGCUGCUCCA
.((((((((((.((((((((((((........)))..)))))))))..))))))))))...

Structure

--U          -A         --   ggg 
   AGCAGCACAG  AAUAUUGGC  Acu   a
   ||||||||||  |||||||||  |||    
   UCGUCGUGUU  UUAUAACCg  uga   a
ACC          GG         uc   acg 

Annotation confidence Not enough data

Genome context

DS562916.1: 9617085-9617145 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-195

Mature cpo-miR-195-5p

• Accession: MIMAT0047076
• Description: Cavia porcellus cpo-miR-195-5p mature miRNA
• Sequence: 1 - UAGCAGCACAGAAAUAUUGGCA - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-195-3p

• Accession: MIMAT0047077
• Description: Cavia porcellus cpo-miR-195-3p mature miRNA
• Sequence: 39 - CCAAUAUUGGUUGUGCUGCUCCA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344