Stem-loop cpo-mir-194

Accession

MI0038683

Description

Cavia porcellus cpo-mir-194 precursor miRNA

Sequence

UGUAACAGCAACUCCAUGUGGAAgugcccacugguuCCAGUGGGGCUGCUGUUAUCUG
.(((((((((.((((((.((((...(((....))))))))))))).)))))))))...

Structure

--U         A      G    Agu   c 
   GUAACAGCA CUCCAU UGGA   gcc a
   ||||||||| |||||| ||||   |||  
   UAUUGUCGU GGGGUG ACCu   ugg c
GUC         C      -    ---   u 

Annotation confidence Not enough data

Genome context

DS562897.1: 5717423-5717480 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-194

Mature cpo-miR-194-5p

• Accession: MIMAT0047074
• Description: Cavia porcellus cpo-miR-194-5p mature miRNA
• Sequence: 1 - UGUAACAGCAACUCCAUGUGGAA - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-194-3p

• Accession: MIMAT0047075
• Description: Cavia porcellus cpo-miR-194-3p mature miRNA
• Sequence: 37 - CCAGUGGGGCUGCUGUUAUCUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344