Stem-loop cpo-mir-155

Accession

MI0038664

Description

Cavia porcellus cpo-mir-155 precursor miRNA

Sequence

UUAAUGCUAAUCGUGAUAGGGGUUuuuaccucugacugaCUCCUACAUGUUAGCAUUAACA
((((((((((.((((.((((((((.............))))))))))))))))))))))..

Structure

--          U    A        uuuac 
  UUAAUGCUAA CGUG UAGGGGUU     c
  |||||||||| |||| ||||||||     u
  AAUUACGAUU GUAC AUCCUCag     c
AC          -    -        ucagu 

Annotation confidence Not enough data

Genome context

DS562907.1: 7888282-7888342 [-]

Mature cpo-miR-155-5p

• Accession: MIMAT0047038
• Description: Cavia porcellus cpo-miR-155-5p mature miRNA
• Sequence: 1 - UUAAUGCUAAUCGUGAUAGGGGUU - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-155-3p

• Accession: MIMAT0047039
• Description: Cavia porcellus cpo-miR-155-3p mature miRNA
• Sequence: 40 - CUCCUACAUGUUAGCAUUAACA - 61
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344