Stem-loop cpo-mir-154

Accession

MI0038663

Description

Cavia porcellus cpo-mir-154 precursor miRNA

Sequence

UAGGUUAUCCGUGUUGCCUUCGuuuuauuuaugucgAAUCAUACGCGGUUGACCUAUU
(((((((.((((((....((((............))))....)))))).)))))))..

Structure

--       U      UGCC    uuuua 
  UAGGUUA CCGUGU    UUCG     u
  ||||||| ||||||    ||||      
  AUCCAGU GGCGCA    AAgc     u
UU       U      UACU    uguau 

Annotation confidence Not enough data

Genome context

DS562966.1: 1112305-1112362 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from cpo-mir-154

Mature cpo-miR-154-5p

• Accession: MIMAT0047036
• Description: Cavia porcellus cpo-miR-154-5p mature miRNA
• Sequence: 1 - UAGGUUAUCCGUGUUGCCUUCG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-154-3p

• Accession: MIMAT0047037
• Description: Cavia porcellus cpo-miR-154-3p mature miRNA
• Sequence: 37 - AAUCAUACGCGGUUGACCUAUU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344