Stem-loop cpo-mir-147

Accession

MI0038655

Description

Cavia porcellus cpo-mir-147 precursor miRNA

Sequence

CGGAAACACUUCCGGACAGGCuugggucuggacaccaGUGUGCGGAAGUGCUUCUGCU
(((((.((((((((.(((...((((((....)).))))))).)))))))).)))))..

Structure

--     A        G   GGC    -  c 
  CGGAA CACUUCCG ACA   uugg gu u
  ||||| |||||||| |||   |||| ||  
  GUCUU GUGAAGGC UGU   Gacc ca g
UC     C        G   ---    a  g 

Annotation confidence Not enough data

Genome context

DS562878.1: 20636312-20636369 [+]

Mature cpo-miR-147-5p

• Accession: MIMAT0047020
• Description: Cavia porcellus cpo-miR-147-5p mature miRNA
• Sequence: 1 - CGGAAACACUUCCGGACAGGC - 21
• Evidence: not_experimental

Mature cpo-miR-147-3p

• Accession: MIMAT0047021
• Description: Cavia porcellus cpo-miR-147-3p mature miRNA
• Sequence: 38 - GUGUGCGGAAGUGCUUCUGCU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344