Stem-loop cpo-mir-146a

Accession

MI0038653

Description

Cavia porcellus cpo-mir-146a precursor miRNA

Literature search

1 open access papers mention cpo-mir-146a
(1 sentences)

Sequence

UGAGAACUGAAUUCCAUGGGUUGugucagcgucagACCUGUGAAAUUCAGUUCUUCAG
.((((((((((((.((((((((.((.......)))))))))).))))))))))))...

Structure

--U            C        G  uc 
   GAGAACUGAAUU CAUGGGUU ug  a
   |||||||||||| |||||||| ||  g
   UUCUUGACUUAA GUGUCCAg ac  c
GAC            A        -  ug 

Annotation confidence Not enough data

Genome context

DS562872.1: 7375710-7375767 [+]

Mature cpo-miR-146a-5p

• Accession: MIMAT0047016
• Description: Cavia porcellus cpo-miR-146a-5p mature miRNA
• Sequence: 1 - UGAGAACUGAAUUCCAUGGGUUG - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-146a-3p

• Accession: MIMAT0047017
• Description: Cavia porcellus cpo-miR-146a-3p mature miRNA
• Sequence: 36 - ACCUGUGAAAUUCAGUUCUUCAG - 58
• Evidence: not_experimental

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344