Stem-loop cpo-mir-141

Accession

MI0038648

Description

Cavia porcellus cpo-mir-141 precursor miRNA

Sequence

CAUCUUCCAGCACAGUGUUGGUuggucuaauugugaagcuccUAACACUGUCUGGUAAAGAUGGC
((((((((((.((((((((((..(.((.......))..)..))))))))))))))..))))))..

Structure

--      --    C          Uu -g  ua 
  CAUCUU  CCAG ACAGUGUUGG  g  uc  a
  ||||||  |||| ||||||||||  |  ||  u
  GUAGAA  GGUC UGUCACAAUc  c  ag  u
CG      AU    -          cu ga  ug 

Annotation confidence Not enough data

Genome context

DS562962.1: 310108-310172 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-141

Mature cpo-miR-141-5p

• Accession: MIMAT0047006
• Description: Cavia porcellus cpo-miR-141-5p mature miRNA
• Sequence: 1 - CAUCUUCCAGCACAGUGUUGGU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-141-3p

• Accession: MIMAT0047007
• Description: Cavia porcellus cpo-miR-141-3p mature miRNA
• Sequence: 43 - UAACACUGUCUGGUAAAGAUGGC - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344