Stem-loop cpo-mir-140

Accession

MI0038647

Description

Cavia porcellus cpo-mir-140 precursor miRNA

Sequence

CAGUGGUUUUACCCUAUGGUAGguuacgucaugcuguucuACCACAGGGUAGAACCACGGAC
..(((((((((((((.(((((((.((.((...)))).))))))).)))))))))))))....

Structure

--CA             A       u  c  c 
    GUGGUUUUACCCU UGGUAGg ua gu  
    ||||||||||||| ||||||| || || a
    CACCAAGAUGGGA ACCAucu gu cg  
CAGG             C       u  -  u 

Annotation confidence Not enough data

Genome context

DS562877.1: 6810958-6811019 [-]

Mature cpo-miR-140-5p

• Accession: MIMAT0047004
• Description: Cavia porcellus cpo-miR-140-5p mature miRNA
• Sequence: 1 - CAGUGGUUUUACCCUAUGGUAG - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-140-3p

• Accession: MIMAT0047005
• Description: Cavia porcellus cpo-miR-140-3p mature miRNA
• Sequence: 41 - ACCACAGGGUAGAACCACGGAC - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344