Stem-loop cpo-mir-138-2

Accession

MI0038645

Description

Cavia porcellus cpo-mir-138-2 precursor miRNA

Sequence

AGCUGGUGUUGUGAAUCAGGCCGacgagcagcgcauccucuuacccgGCUAUUUCACGACACCAGGGU
..(((((((((((((...(((((..(((.((......)))))...)))))..)))))))))))))...

Structure

-AG             UCA     -ac   c  cg 
   CUGGUGUUGUGAA   GGCCG   gag ag  c
   |||||||||||||   |||||   ||| ||   
   GACCACAGCACUU   UCGgc   uuc uc  a
UGG             -UA     cca   -  cu 

Annotation confidence Not enough data

Genome context

DS562877.1: 25185275-25185342 [-]

Mature cpo-miR-138-5p

• Accession: MIMAT0046999
• Description: Cavia porcellus cpo-miR-138-5p mature miRNA
• Sequence: 1 - AGCUGGUGUUGUGAAUCAGGCCG - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-138-2-3p

• Accession: MIMAT0047001
• Description: Cavia porcellus cpo-miR-138-2-3p mature miRNA
• Sequence: 48 - GCUAUUUCACGACACCAGGGU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344