Stem-loop cpo-mir-135b

Accession

MI0038642

Description

Cavia porcellus cpo-mir-135b precursor miRNA

Sequence

UAUGGCUUUUCAUUCCUAUGUGAuugcuguuccaaauucAUGUAGGGCUAAAAGCCAUGGG
((((((((((...(((((((((((((......)))..))))))))))..))))))))))..

Structure

--          CAU          --   cu 
  UAUGGCUUUU   UCCUAUGUGA  uug  g
  ||||||||||   ||||||||||  |||   
  GUACCGAAAA   GGGAUGUAcu  aac  u
GG          -UC          ua   cu 

Annotation confidence Not enough data

Genome context

DS562867.1: 17315920-17315980 [+]

Mature cpo-miR-135b-5p

• Accession: MIMAT0046995
• Description: Cavia porcellus cpo-miR-135b-5p mature miRNA
• Sequence: 1 - UAUGGCUUUUCAUUCCUAUGUGA - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-135b-3p

• Accession: MIMAT0046996
• Description: Cavia porcellus cpo-miR-135b-3p mature miRNA
• Sequence: 40 - AUGUAGGGCUAAAAGCCAUGGG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344