Stem-loop cpo-mir-133b

Accession

MI0038638

Description

Cavia porcellus cpo-mir-133b precursor miRNA

Sequence

GCUGGUCAAACGGAACCAAGUCcgucuuccugagaggUUUGGUCCCCUUCAACCAGCUA
((((((..((.((.((((((.((.((((...)))))))))))).)).))..))))))..

Structure

--      CA  C  A      U  g    c 
  GCUGGU  AA GG ACCAAG Cc ucuu  
  ||||||  || || |||||| || |||| c
  CGACCA  UU CC UGGUUU gg agag  
AU      AC  C  C      -  -    u 

Annotation confidence Not enough data

Genome context

DS562867.1: 49862235-49862293 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-133b

Mature cpo-miR-133b-5p

• Accession: MIMAT0046988
• Description: Cavia porcellus cpo-miR-133b-5p mature miRNA
• Sequence: 1 - GCUGGUCAAACGGAACCAAGUC - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-133b-3p

• Accession: MIMAT0046989
• Description: Cavia porcellus cpo-miR-133b-3p mature miRNA
• Sequence: 38 - UUUGGUCCCCUUCAACCAGCUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344