Stem-loop cpo-mir-133a-2

Accession

MI0038637

Description

Cavia porcellus cpo-mir-133a-2 precursor miRNA

Sequence

AGCUGGUAAAAUGGAACCAAAUCgccucuucaauggaUUUGGUCCCCUUCAACCAGCUGU
(((((((..((.((.((((((((............)))))))).)).))..)))))))..

Structure

--       AA  U  A        gccuc 
  AGCUGGU  AA GG ACCAAAUC     u
  |||||||  || || ||||||||      
  UCGACCA  UU CC UGGUUUag     u
UG       AC  C  C        guaac 

Annotation confidence Not enough data

Genome context

DS562869.1: 40575096-40575155 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-133a-2

Mature cpo-miR-133a-5p

• Accession: MIMAT0046986
• Description: Cavia porcellus cpo-miR-133a-5p mature miRNA
• Sequence: 1 - AGCUGGUAAAAUGGAACCAAAUC - 23
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-133a-3p

• Accession: MIMAT0046987
• Description: Cavia porcellus cpo-miR-133a-3p mature miRNA
• Sequence: 38 - UUUGGUCCCCUUCAACCAGCUGU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344