Stem-loop cpo-mir-130b

Accession

MI0038634

Description

Cavia porcellus cpo-mir-130b precursor miRNA

Sequence

ACUCUUUCCCUGUUGCACUACUgugggcuacugggaagCAGUGCAAUGAUGAAAGGGCAU
.(((((((..(((((((((.((..((....))....)).)))))))))..)))))))...

Structure

--A       CC         A  --gu  g 
   CUCUUUC  UGUUGCACU CU    gg c
   |||||||  ||||||||| ||    ||  
   GGGAAAG  GUAACGUGA ga    uc u
UAC       UA         C  aggg  a 

Annotation confidence Not enough data

Genome context

DS562859.1: 19664670-19664729 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cpo-mir-130b

Mature cpo-miR-130b-5p

• Accession: MIMAT0046982
• Description: Cavia porcellus cpo-miR-130b-5p mature miRNA
• Sequence: 1 - ACUCUUUCCCUGUUGCACUACU - 22
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-130b-3p

• Accession: MIMAT0046983
• Description: Cavia porcellus cpo-miR-130b-3p mature miRNA
• Sequence: 39 - CAGUGCAAUGAUGAAAGGGCAU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344