Stem-loop cpo-mir-125a

Accession

MI0038624

Description

Cavia porcellus cpo-mir-125a precursor miRNA

Sequence

UCCCUGAGACCCUUUAACCUGUGAggacauccagggucACAGGUGAGGUUCUUGGGAGCC
((((.((((.((((..((((((((((....))....)))))))))))).))))))))...

Structure

---    U    C    UA        ----  a 
   UCCC GAGA CCUU  ACCUGUGA    gg c
   |||| |||| ||||  ||||||||    ||  
   AGGG UUCU GGAG  UGGACAcu    cc a
CCG    -    U    --        ggga  u 

Annotation confidence Not enough data

Genome context

DS562925.1: 6339828-6339887 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cpo-mir-125a

Mature cpo-miR-125a-5p

• Accession: MIMAT0046965
• Description: Cavia porcellus cpo-miR-125a-5p mature miRNA
• Sequence: 1 - UCCCUGAGACCCUUUAACCUGUGA - 24
• Evidence: experimental ; Illumina [1]

Mature cpo-miR-125a-3p

• Accession: MIMAT0046966
• Description: Cavia porcellus cpo-miR-125a-3p mature miRNA
• Sequence: 39 - ACAGGUGAGGUUCUUGGGAGCC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26733575
   The Interrelationships of Placental Mammals and the Limits of Phylogenetic Inference
   "Tarver JE, Dos Reis M, Mirarab S, Moran RJ, Parker S, O'Reilly JE, King BL, O'Connell MJ, Asher RJ, Warnow T, Peterson KJ, Donoghue PC, Pisani D"
   "Genome Biol Evol (2016) 8:330-344